fMegCyp1.pri Jun. 2020 hub_72_GCF_013368585.1 NC_050583.1:24,671,877-24,681,877 UCSC Genome Browser v504

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Skip to main content UCSC Genome Browser on fMegCyp1.pri Jun. 2020 Indo-Pacific tarpon (2020) (GCF_013368585.1)
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chr1:24,671,877-24,681,877 10,001 bp.

Examples

Visible Tracks

NCBI RefSeq

CpG Islands

Hub: EyeBrowse

Track hub error : badly formed url https:/hpc.nih.gov/eyebrowse/hub.txt, expected :// after the protocol

Hub: EPD Viewer Hub

Track hub error : badly formed url https:/epd.expasy.org/epd/ucsc/epdHub/epdHub.txt, expected :// after the protocol

Hub: MutScore Variant Pathogenicity

Track hub error : badly formed url https:/mutscore-ucsc.iob.ch/hub.txt, expected :// after the protocol

Hub: CESAR Gene Mappings

Track hub error : badly formed url https:/bds.mpi-cbg.de/hillerlab/CESAR/trackHub/hub.txt, expected :// after the protocol

Hub: UniBind 2021 permissive Hub

Track hub error : badly formed url https:/unibind.uio.no/static/data/latest/UniBind_hubs_Permissive/UCSC/hub.txt, expected :// after the protocol

Hub: Exp/Meth VNTR hub

Track hub error : badly formed url https:/raw.githubusercontent.com/AndyMSSMLab/UCSC_exp_meth_VNTR/main/hub.txt, expected :// after the protocol

Mapping and Sequencing

Base Position

All Gaps

Assembly

Chromosome Band (Ideogram)

GC Percent

Restr Enzymes

Short Match

Tandem Dups

Genes and Gene Predictions

NCBI RefSeq

Ensembl genes

Augustus

RNA and Transcriptome

RefSeq mRNAs

Expression and Regulation

CpG Islands

Variation and Repeats

left 10%	ctrl+j	track search	t then s
left 1/2 screen	j	default tracks	d then t
left one screen	J	default order	d then o
right 10%	ctrl+l	hide all	h then a
right 1/2 screen	l	custom tracks	c then t
right one screen	L	track collections	t then c
jump to position box	/	track hubs	t then h
zoom in 1.5x	ctrl+i	configure	c then f
zoom in 3x	i	reverse	r then v
zoom in 10x	I	resize	r then s
zoom in base level	b	refresh	r then f
zoom out 1.5x	ctrl+k	view chrom names	v then s
zoom out 3x	k	send to external tool	s then t
zoom out 10x	K	exon view	e then v
zoom out 100x	0	default view	d then v
zoom to ...		view DNA	v then d
50bp (1 zero)	1	Reset all User Settings	c then r
500bp (2 zeros)	2	Tools - BLAT	t then b
5000bp (3 zeros)	3	Tools - Table Browser	t then t
50kbp (4 zeros)	4	Tools - PCR	t then i
500kbp (5 zeros)	5	My Sessions	s then s
5Mbp (6 zeros)	6	Public Sessions	p then s
highlight all (mark)	h then m	clear all Highlights	h then c
quick connect hub	c then h