Skip to main content UCSC Genome Browser on Human Repeats DFAM Consensus Repeats (hg38reps)
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L1HS:1-6,049 6,049 bp.
  
-   Visible Tracks  
Short Match
Consensus Sequence
Consensus Annotations
GENCODEv32 CDS
GENCODEv32 UTRs
Tandem Repeats
ENCODE DNAse
ENCODE TFBS
ENCODE UW Histone
Imbeault 2017
Schmittges 2016
Theunissen 2016
Tsankov 2014
-   Hub: EyeBrowse  
Track hub error : badly formed url https:/hpc.nih.gov/eyebrowse/hub.txt, expected :// after the protocol
-   Hub: EPD Viewer Hub  
Track hub error : badly formed url https:/epd.expasy.org/epd/ucsc/epdHub/epdHub.txt, expected :// after the protocol
-   Hub: Invertebrate assemblies  
Track hub error : badly formed url https:/hgdownload.soe.ucsc.edu/hubs/invertebrate/hub.txt, expected :// after the protocol
-   Hub: Mammal and Bird Alignment (605 species)  
Track hub error : badly formed url https:/cgl.gi.ucsc.edu/data/cactus/605-vertebrate-2020-hub/Dyaphorophyia_castanea/trackDb.txt, expected :// after the protocol
-   Hub: Bird Alignment (363 species)  
Track hub error : badly formed url https:/cgl.gi.ucsc.edu/data/cactus/363-avian-2020-hub/Uria_aalge/trackDb.txt, expected :// after the protocol
-   Hub: Fish assemblies  
Track hub error : badly formed url https:/hgdownload.soe.ucsc.edu/hubs/fish/hub.txt, expected :// after the protocol
-   Hub: Bird assemblies  
Track hub error : badly formed url https:/hgdownload.soe.ucsc.edu/hubs/birds/hub.txt, expected :// after the protocol
-   Hub: Fungi assemblies  
Track hub error : badly formed url https:/hgdownload.soe.ucsc.edu/hubs/fungi/hub.txt, expected :// after the protocol
-   Hub: Exp/Meth VNTR hub  
Track hub error : badly formed url https:/raw.githubusercontent.com/AndyMSSMLab/UCSC_exp_meth_VNTR/main/hub.txt, expected :// after the protocol
-   Mapping and Sequencing  
Base Position
Restr Enzymes
Short Match
-   Annotations of Repeat Consensuses  
Consensus Sequence
Consensus Annotations
GENCODEv32 CDS
GENCODEv32 ncRNA
GENCODEv32 UTRs
Tandem Repeats
Self Alignments
-   Individual Repeat Mappings from the Human Genome  
Instances Mappings (hg38)
Mapping Coverage (hg38)
-   Meta Summits from Collections  
ENCODE DNAse
ENCODE TFBS
ENCODE UW Histone
Imbeault 2017
Schmittges 2016
Theunissen 2016
Tsankov 2014
-   Histone Marks & DNAse Hypersensitivity  
ENCODE DNAse Coverage
ENCODE DNAse Summits
ENCODE UW Histone Coverage
ENCODE UW_Histone Summits
-   Coverage of Chip-Seq summits from large screens  
ENCODE_TFBS
Imbeault_Trono 2017
Schmittges_Hughes 2016
theunissen2016S
Tsankov_Meissner 2014
-   Individual Chip-Seq summits from large screens  
ENCODE_TFBS Summits
Imbeault_Trono 2017
Schmittges_Hughes 2016
theunissen2016Summits
Tsankov_Meissner 2014
-   Mappings of Full Length Primate L1PA Elements  
Bonobo L1PA panPan2
Chimp L1PA panTro6
Gibbon L1PA nomLeu3
Gorilla L1PA gorGor5
Human L1PA hg38
Orang L1PA ponAbe3
     
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